SMTL ID : 7lbj.1

Crystal structure of octaprenyl diphosphate synthase from Stenotrophomonas maltophilia

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: M.9, H.65 Ligand excluded by PLIP

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: H.110, V.111, F.113, E.115 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.113 Water bridges: A:E.115 EDO.3: 7 residues within 4Å: Chain A: P.37, R.39, L.40, T.117 Chain B: A.164, I.167, D.168 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.39, A:L.40 Water bridges: A:T.117 EDO.4: 3 residues within 4Å: Chain A: D.213, S.214, D.217 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.192, A:D.213, A:D.213 Water bridges: A:S.214, A:S.214, A:D.217

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bolejack, M.J. et al., Crystal structure of octaprenyl diphosphate synthase from Stenotrophomonas maltophilia. to be published

Release Date

2021-02-03

Peptides

Geranyltranstransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Geranyltranstransferase