SMTL ID : 7lbx.1

Crystal structure of TFAM (mitochondrial transcription factor A) in complex with LSP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: M.92, D.93, L.96 Chain B: M.92, D.93, L.96 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.93 EDO.2: 2 residues within 4Å: Chain A: S.6, Q.78 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.6, A:S.6 EDO.3: 3 residues within 4Å: Chain A: S.82 Chain B: S.82, S.86 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.82, B:S.86 EDO.4: 2 residues within 4Å: Chain B: W.65, K.69 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.69 EDO.5: 3 residues within 4Å: Chain B: M.173, K.174, E.177 No protein-ligand interaction detected (PLIP)

2 x MG: MAGNESIUM ION(Non-functional Binders)

MG.6: 4 residues within 4Å: Chain C: A.4, C.5 Chain D: T.17, G.18 No protein-ligand interaction detected (PLIP) MG.7: 4 residues within 4Å: Chain C: C.12, C.13 Chain D: G.11, G.12 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choi, W.S. et al., A minimal motif for sequence recognition by mitochondrial transcription factor A (TFAM). Nucleic Acids Res. (2022)

Release Date

2022-01-19

Peptides

Transcription factor A, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcription factor A, mitochondrial

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