SMTL ID : 7lde.1

native AMPA receptor

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-2-2-mer
Ligands
5 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x ZK1: {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid(Non-covalent)
2 x R16: HEXADECANE(Non-covalent)
6 x OCT: N-OCTANE(Non-functional Binders)(Non-covalent)
4 x HP6: HEPTANE(Non-covalent)
6 x D10: DECANE(Non-covalent)(Non-functional Binders)
7 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
6 x D12: DODECANE(Non-covalent)(Non-functional Binders)
6 x C14: TETRADECANE(Non-covalent)(Non-functional Binders)
4 x DD9: nonane(Non-covalent)
2 x XVD: 6-[2-chloro-6-(trifluoromethoxy)phenyl]-1H-benzimidazol-2-ol(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yu, J. et al., Hippocampal AMPA receptor assemblies and mechanism of allosteric inhibition. Nature (2021)
Release Date
2021-05-12
Peptides
Glutamate receptor 1: AC
Glutamate receptor: BD
Protein cornichon homolog 2: EF
Voltage-dependent calcium channel gamma-8 subunit: GH
11B8 scFv: IL
15F1 Fab light chain: JM
15F1 Fab heavy chain: KN
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
B
B
D
D
E
E
F
F
G
G
H
H
I
I
L
L
J
J
M
M
K
K
N
N
Membrane
We predict this structure to be a membrane protein.

Glutamate receptor 1

Toggle Identical (AC)

Glutamate receptor

Toggle Identical (BD)

Protein cornichon homolog 2

Toggle Identical (EF)

Voltage-dependent calcium channel gamma-8 subunit

Toggle Identical (GH)

11B8 scFv

Toggle Identical (IL)

15F1 Fab light chain

Toggle Identical (JM)

15F1 Fab heavy chain

Toggle Identical (KN)

Related Entries With Identical Sequence

6njl.1 | 6njm.1 | 6njn.1 | 7ldd.1