SMTL ID : 7ler.1

Netrin-1 filament assembly

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 5.99 Å
Oligo State
homo-48-mer
Ligands
48 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
48 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
96 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Meier, M. et al., The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation. Nat Commun (2023)
Release Date
2022-02-23
Peptides
Netrin-1: ABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789abcdefghijkl
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
E
E
D
F
F
G
G
H
H
I
A
J
B
K
C
L
E
M
D
N
F
O
G
P
H
Q
A
R
B
S
C
T
E
U
D
V
F
W
G
X
H
Y
A
Z
B
0
C
1
E
2
D
3
F
4
G
5
H
6
A
7
B
8
C
9
E
a
D
b
F
c
G
d
H
e
A
f
B
g
C
h
E
i
D
j
F
k
G
l
H