SMTL ID : 7lhb.2 (2 other biounits)

Crystal structure of Bcl-2 in complex with prodrug ABBV-167

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x XZD: Phosphoric acid mono-[5-(5-{4-[2-(4-chloro-phenyl)-4,4-dimethyl-cyclohex-1-enylmethyl]-piperazin-1-yl}-2-{3-nitro-4-[(tetrahydro-pyran-4-ylmethyl)-amino]-benzenesulfonylaminocarbonyl}-phenoxy)-pyrrolo[2,3-b]pyridin-7-ylmethyl] ester(Non-covalent)

XZD.1: 22 residues within 4Å: Chain A: Q.58, A.59, D.62, F.63, R.66, Y.67, D.70, F.71, M.74, E.95, L.96, N.102, W.103, G.104, R.105, V.107, A.108, E.111, F.112, V.115, F.157, Y.161 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:A.59, A:F.63, A:F.63, A:F.63, A:Y.67, A:M.74, A:E.95, A:L.96, A:R.105, A:V.107, A:F.112, A:Y.161, A:Y.161 Hydrogen bonds: A:D.62, A:N.102, A:G.104 Water bridges: A:R.66, A:Y.67, A:Y.161 Salt bridges: A:D.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Salem, A.H. et al., Expanding the Repertoire for "Large Small Molecules": Prodrug ABBV-167 Efficiently Converts to Venetoclax with Reduced Food Effect in Healthy Volunteers. Mol.Cancer Ther. (2021)

Release Date

2021-04-14

Peptides

Apoptosis regulator Bcl-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Apoptosis regulator Bcl-2

Related Entries With Identical Sequence