SMTL ID : 7lhm.1 (1 other biounit)

Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A:Q38L mutant of cellular retinol binding protein II complex with all-trans-retinal

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 12 residues within 4Å: Chain A: Y.60, V.62, F.64, F.70, E.72, A.84, V.86, C.95, Q.97, W.106 Ligands: RET.2, GOL.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.62, A:F.70 Hydrogen bonds: A:E.72, A:Q.97

1 x RET: RETINAL(Covalent)

RET.2: 14 residues within 4Å: Chain A: A.33, L.38, L.40, C.53, S.55, W.58, Y.60, L.77, W.106, K.108, L.117, L.119 Ligands: ACT.1, GOL.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.33, A:L.40, A:W.58, A:Y.60, A:L.77, A:W.106, A:K.108, A:L.117, A:L.119

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 11 residues within 4Å: Chain A: W.19, Y.60, L.77, Q.97, R.104, G.105, W.106, L.119, T.120 Ligands: ACT.1, RET.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.60, A:Q.97, A:R.104, A:G.105, A:G.105, A:T.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ehyaei, N. et al., Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A:Q38L mutant of cellular retinol binding protein II complex with all-trans-retinal. To Be Published

Release Date

2021-04-14

Peptides

Retinol-binding protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Retinol-binding protein 2

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