SMTL ID : 7lid.1

The structure of the insect olfactory receptor OR5 from Machilis hrabei in complex with eugenol

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x EOL: 2-methoxy-4-(prop-2-en-1-yl)phenol(Non-covalent)

EOL.1: 8 residues within 4Å: Chain A: V.92, S.155, G.158, W.162, M.213, I.217, Y.384, Y.387 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.92, A:W.162, A:I.217, A:I.217, A:Y.384, A:Y.384 Hydrogen bonds: A:L.383 pi-Stacking: A:W.162 EOL.2: 8 residues within 4Å: Chain B: V.92, S.155, G.158, W.162, M.213, I.217, Y.384, Y.387 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:V.92, B:W.162, B:I.217, B:I.217, B:Y.384, B:Y.384 Hydrogen bonds: B:L.383 pi-Stacking: B:W.162 EOL.3: 8 residues within 4Å: Chain C: V.92, S.155, G.158, W.162, M.213, I.217, Y.384, Y.387 8 PLIP interactions: 8 interactions with chain C Hydrophobic interactions: C:V.92, C:W.162, C:I.217, C:I.217, C:Y.384, C:Y.384 Hydrogen bonds: C:L.383 pi-Stacking: C:W.162 EOL.4: 8 residues within 4Å: Chain D: V.92, S.155, G.158, W.162, M.213, I.217, Y.384, Y.387 8 PLIP interactions: 8 interactions with chain D Hydrophobic interactions: D:V.92, D:W.162, D:I.217, D:I.217, D:Y.384, D:Y.384 Hydrogen bonds: D:L.383 pi-Stacking: D:W.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Del Marmol, J. et al., The structural basis of odorant recognition in insect olfactory receptors. Nature (2021)

Release Date

2021-08-11

Peptides

MhOR5: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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MhOR5

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