SMTL ID : 7lmc.2 (1 other biounit)

Structure of SARS CoV-2 main protease shows simultaneous processing of its N- and C-terminii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.98 Å

Oligo State

homo-dimer

Ligands

1 x THR- SER- ALA- VAL- LEU- GLN: Non-structural protein 4 peptide(Non-covalent)

THR-SER-ALA-VAL-LEU-GLN.1: 19 residues within 4Å: Chain B: H.41, M.49, F.140, L.141, N.142, G.143, S.144, A.145, H.163, H.164, M.165, E.166, L.167, P.168, D.187, Q.189, T.190, A.191, Q.192 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:H.41, B:M.165, B:L.167, B:P.168, B:D.187, B:Q.192 Hydrogen bonds: B:N.142, B:G.143, B:S.144, B:S.144, B:A.145, B:H.164, B:E.166, B:E.166, B:E.166, B:Q.189, B:Q.189, B:Q.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferre, R.A. et al., SARS coronavirus-2 main protease dimer auto-processes N-terminus in cis and C-terminus in trans. To Be Published

Release Date

2021-04-14

Peptides

3C-like proteinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

3C-like proteinase

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