SMTL ID : 7lql.1 (1 other biounit)

Crystal structure of the R375D mutant of LeuT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain A: G.20, V.23, G.24, A.351, T.354, S.355 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.355 NA.2: 8 residues within 4Å: Chain A: A.22, V.23, G.24, N.27, T.254, N.286, E.290 Ligands: ALA.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Ligand interactions Hydrogen bonds: A:G.24, A:N.27, A:N.286, A:E.290, A.3

1 x ALA: ALANINE(Non-covalent)

ALA.3: 13 residues within 4Å: Chain A: N.21, A.22, G.24, L.25, G.26, N.27, Y.108, F.253, T.254, L.255, S.256, S.355 Ligands: NA.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.253 Hydrogen bonds: A:G.24, A:G.26, A:N.27, A:Y.108, A:S.256, A:S.256, A:S.355

4 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.4: 6 residues within 4Å: Chain A: P.164, S.165, L.166, Y.169, H.391, F.395 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.164 BOG.5: 4 residues within 4Å: Chain A: P.445, R.446, I.447, Y.448 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.447 Hydrogen bonds: A:R.446 BOG.6: 2 residues within 4Å: Chain A: F.167, I.170 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.170 BOG.7: 4 residues within 4Å: Chain A: E.159, I.161, K.163, F.395 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.161, A:F.395 Hydrogen bonds: A:K.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aguilar, J.I. et al., Psychomotor impairments and therapeutic implications revealed by a mutation associated with infantile Parkinsonism-Dystonia. Elife (2021)

Release Date

2021-05-19

Peptides

Na(+):neurotransmitter symporter (Snf family): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Na(+):neurotransmitter symporter (Snf family)

Related Entries With Identical Sequence