SMTL ID : 7lsw.2 (3 other biounits)

Structure of Full Beta-Hairpin LIR from FNIP2 Bound to GABARAP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

homo-dimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.23, N.24, N.109, E.125, H.126 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.24, A:N.109 Salt bridges: A:R.23, A:H.126 SO4.2: 4 residues within 4Å: Chain A: K.34, P.38, F.39, R.42 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.30, A:R.42 SO4.3: 6 residues within 4Å: Chain A: S.15, E.16 Chain B: D.73, K.74, K.75, K.76 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.75, B:K.76, A:S.15, A:S.15 Salt bridges: B:K.74 SO4.4: 4 residues within 4Å: Chain B: K.34, F.39, R.42, E.128 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.128 Salt bridges: B:K.34, B:R.42 SO4.5: 2 residues within 4Å: Chain B: K.94, H.97 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.94 Salt bridges: B:H.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goodwin, J.M. et al., GABARAP sequesters the FLCN-FNIP tumor suppressor complex to couple autophagy with lysosomal biogenesis. Sci Adv (2021)

Release Date

2021-10-13

Peptides

Folliculin-interacting protein 2,Gamma-aminobutyric acid receptor-associated protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Folliculin-interacting protein 2,Gamma-aminobutyric acid receptor-associated protein

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