SMTL ID : 7lvy.1

Crystal Structure of Tetur04g02350

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 19 residues within 4Å: Chain A: F.46, G.47, N.50, R.277, Q.280, S.301, G.303, S.304, S.330, F.349, L.350, Q.352, H.365, G.367, N.368, N.369, T.370, E.373 Ligands: BGC.3 26 PLIP interactions: 26 interactions with chain A Hydrogen bonds: A:G.47, A:N.50, A:R.277, A:R.277, A:Q.280, A:S.304, A:S.330, A:L.350, A:L.350, A:Q.352, A:Q.352, A:N.368, A:N.369, A:N.369, A:T.370, A:E.373 Water bridges: A:S.301, A:S.301, A:L.302, A:S.304, A:S.304, A:M.305, A:Q.390 Salt bridges: A:H.365, A:H.365 pi-Stacking: A:F.349

2 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.2: 8 residues within 4Å: Chain A: I.130, Y.161, C.180, N.184, S.194, C.195, G.388, D.389 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.184, A:S.194, A:S.194, A:D.389, A:D.389, A:D.389 Water bridges: A:D.389 BGC.3: 13 residues within 4Å: Chain A: G.47, H.48, Y.161, S.179, M.305, H.365, G.367, N.368, N.369, F.387, D.389, Q.390 Ligands: UDP.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:H.48, A:S.179, A:N.368, A:N.369, A:N.369, A:Q.390 Water bridges: A:D.389

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Danehsian, L. et al., Crystal Structure of Tetur04g02350. To Be Published

Release Date

2022-03-02

Peptides

UDP-glycosyltransferase 203A2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-glycosyltransferase 203A2

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