SMTL ID : 7lyu.1 (1 other biounit)

Reelin repeat 8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN.1: 3 residues within 4Å: Chain A: D.308, H.313, N.371 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.2: 9 residues within 4Å: Chain A: S.98, Q.118, E.136, A.137, I.139, N.141, V.143, N.144, R.369 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.118, A:S.98, A:Q.118, A:A.137 Hydrophobic interactions: A:Q.118, A:E.136, A:A.137

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain A: T.21, S.50, F.51, D.183 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:T.21, A:S.50, A:D.183 CA.4: 5 residues within 4Å: Chain A: N.232, E.234, H.263, D.265, D.381 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:N.232, A:H.263, A:D.381, A:D.381

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Turk, L.S. et al., Structure of Reelin repeat 8 and the adjacent C-terminal region. Biophys.J. (2022)

Release Date

2022-06-15

Peptides

Reelin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Reelin

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