SMTL ID : 7m3i.2 (1 other biounit)

Structure of SARS-CoV-2 spike protein receptor binding domain in complex with a neutralizing antibody, CV2-75 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 7 residues within 4Å: Chain C: F.20, G.21, F.24, N.25, V.49, L.50, S.53 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:F.20, C:F.24, C:L.50 Hydrogen bonds: C:N.25, C:V.49, C:S.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jennewein, M.F. et al., Isolation and characterization of cross-neutralizing coronavirus antibodies from COVID-19+ subjects. Cell Rep (2021)

Release Date

2021-05-12

Peptides

CV2-75 Fab Heavy chain: A
CV2-75 Fab Light chain: B
Spike protein S1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
R

CV2-75 Fab Heavy chain

CV2-75 Fab Light chain

Spike protein S1

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