SMTL ID : 7mji.1

Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to VH ab8 (focused refinement of RBD and VH ab8)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: F.338, G.339, N.343 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.343

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, X. et al., Cryo-electron microscopy structures of the N501Y SARS-CoV-2 spike protein in complex with ACE2 and 2 potent neutralizing antibodies. Plos Biol. (2021)

Release Date

2021-05-12

Peptides

Spike glycoprotein: A
VH ab8: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
E

Spike glycoprotein

VH ab8

Related Entries With Identical Sequence