SMTL ID : 7mkm.1

SARS-CoV-2 Spike RBD in complex with neutralizing Fab SARS2-38 (local refinement)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: N.11, S.39 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

VanBlargan, L.A. et al., A potently neutralizing SARS-CoV-2 antibody inhibits variants of concern by utilizing unique binding residues in a highly conserved epitope. Immunity (2021)

Release Date

2021-05-12

Peptides

Spike protein S1: A
SARS2-38 Fv heavy chain: B
SARS2-38 Fv light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Spike protein S1

SARS2-38 Fv heavy chain

SARS2-38 Fv light chain

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