SMTL ID : 7mqj.1

Dhr1 Helicase Core

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.45, D.140, S.391 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.45, H2O.2, H2O.2, H2O.4, H2O.5

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 13 residues within 4Å: Chain A: E.39, T.40, G.41, S.42, G.43, K.44, T.45, T.46, M.82, R.85, F.371, T.393 Ligands: MG.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:G.41, A:S.42, A:G.43, A:K.44, A:T.45, A:T.45, A:T.46, A:T.46 Water bridges: A:G.41, A:K.44, A:K.44, A:T.45, A:T.45, A:T.45, A:R.85, A:N.88 Salt bridges: A:K.44 pi-Cation interactions: A:R.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, S. et al., Nucleolar maturation of the human small subunit processome. Science (2021)

Release Date

2021-09-22

Peptides

Probable ATP-dependent RNA helicase DHR1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Probable ATP-dependent RNA helicase DHR1