SMTL ID : 7msa.2 (1 other biounit)

GDC-9545 in complex with estrogen receptor alpha

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

homo-dimer

Ligands

1 x ZNM: 3-[(1R,3R)-1-(2,6-difluoro-4-{[1-(3-fluoropropyl)azetidin-3-yl]amino}phenyl)-3-methyl-1,3,4,9-tetrahydro-2H-pyrido[3,4-b]indol-2-yl]-2,2-difluoropropan-1-ol(Non-covalent)

ZNM.1: 21 residues within 4Å: Chain A: M.70, L.73, T.74, L.76, A.77, D.78, E.80, W.110, L.111, L.114, M.115, L.118, R.121, F.131, M.148, I.151, L.155, G.248, H.251, L.252, P.262 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.76, A:A.77, A:L.114, A:L.114, A:L.118, A:F.131, A:L.155, A:L.252, A:P.262 Hydrogen bonds: A:H.251 Salt bridges: A:D.78 pi-Stacking: A:F.131

1 x G9J: (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol(Non-covalent)

G9J.2: 16 residues within 4Å: Chain B: L.73, T.74, L.76, A.77, E.80, W.110, L.114, M.115, L.118, R.121, F.131, M.148, I.151, G.248, H.251, L.252 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.76, B:A.77, B:W.110, B:L.114, B:L.118, B:I.151, B:L.252 Hydrogen bonds: B:L.114, B:R.121, B:H.251 Water bridges: B:R.121 pi-Stacking: B:F.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, J. et al., GDC-9545 (Giredestrant): A Potent and Orally Bioavailable Selective Estrogen Receptor Antagonist and Degrader with an Exceptional Preclinical Profile for ER+ Breast Cancer. J.Med.Chem. (2021)

Release Date

2021-06-02

Peptides

Estrogen receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
B

Estrogen receptor

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