SMTL ID : 7msb.1

Structure of EED bound to EEDi-4259

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ZNG: (9aM,12aS)-12-{[(5-fluoro-1-benzofuran-4-yl)methyl]amino}-7-(trifluoromethyl)-4,5-dihydro-3H-2,4,11,12a-tetraazabenzo[4,5]cycloocta[1,2,3-cd]inden-3-one(Non-covalent)

ZNG.1: 11 residues within 4Å: Chain A: P.22, F.24, Y.75, N.121, K.138, L.167, D.237, Y.292, M.293, R.294, R.341 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.24, A:F.24, A:D.237, A:Y.292, A:Y.292, A:R.294 Hydrogen bonds: A:N.121, A:K.138 pi-Stacking: A:Y.75, A:Y.75, A:Y.292, A:Y.292, A:Y.292 pi-Cation interactions: A:R.294

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rej, R.K. et al., Discovery of EEDi-5273 as an Exceptionally Potent and Orally Efficacious EED Inhibitor Capable of Achieving Complete and Persistent Tumor Regression. J.Med.Chem. (2021)

Release Date

2021-10-20

Peptides

Polycomb protein EED: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polycomb protein EED

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