SMTL ID : 7msp.1 (1 other biounit)

SunS glycosin S-glycosyltransferase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE(Non-covalent)

UPG.1: 21 residues within 4Å: Chain A: I.61, V.62, Y.63, E.65, S.88, W.112, F.116, R.120, D.136, A.137, D.138, R.182, V.196, H.197, E.198, H.219, Y.222, K.232, R.235, N.236 Ligands: MG.2 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:Y.63, A:Y.63, A:E.65, A:E.65, A:S.88, A:S.88, A:R.120, A:R.120, A:A.137, A:D.138, A:R.182, A:H.197, A:N.236 Water bridges: A:D.136, A:R.182 Salt bridges: A:H.219, A:K.232, A:K.232, A:R.235, A:R.235 pi-Stacking: A:F.116

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.138, H.219, K.232 Ligands: UPG.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.138, A:D.138, A:H.219, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fujinami, D. et al., Structural and mechanistic investigations of protein S-glycosyltransferases. Cell Chem Biol (2021)

Release Date

2022-04-13

Peptides

SPbeta prophage-derived glycosyltransferase SunS: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SPbeta prophage-derived glycosyltransferase SunS

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