SMTL ID : 7mw5.1

Structure of the SARS-CoV-2 Spike trimer with one RBD down in complex with the Fab fragment of human neutralizing antibody clone 2

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-mer
Ligands
29 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
25 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Peng, L. et al., Monospecific and bispecific monoclonal SARS-CoV-2 neutralizing antibodies that maintain potency against B.1.617. Nat Commun (2022)
Release Date
2022-03-16
Peptides
Fab of antibody clone 2, light chain: AEH
Fab of antibody clone 2, heavy chain: BFI
Spike glycoprotein: CDG
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
L
E
G
H
E
B
H
F
F
I
D
C
C
D
B
G
A

Fab of antibody clone 2, light chain

Toggle Identical (AE)

Fab of antibody clone 2, heavy chain

Toggle Identical (BF)

Spike glycoprotein

Toggle Identical (DG)

Related Entries With Identical Sequence

6vsb.1 | 6xey.1 | 6zow.1 | 6zp5.1 | 6zp7.1 | 6zxn.1 | 7a29.1 | 7b18.1 | 7kkk.1 | 7kkl.1 | 7kms.1 | 7kmz.1 | 7knb.1 | 7kne.1 | 7knh.1 | 7kni.1 | 7ks9.1 | 7ksg.1 | 7l2d.1 | 7l2e.1 | 7l2f.1 | 7l56.1 | 7l57.1 | 7l58.1 | 7ljr.1 | 7ls9.1 | 7lss.1 | 7mw2.1 | 7mw3.1 | 7mw4.1  more...