SMTL ID : 7mwm.2 (1 other biounit)

Crystal structure of MBD2 with DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

18 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 2 residues within 4Å: Chain A: K.45, R.47 Ligand excluded by PLIP UNX.2: 3 residues within 4Å: Chain A: V.23, K.25, D.35 Ligand excluded by PLIP UNX.3: 2 residues within 4Å: Chain A: K.26 Chain B: A.5 Ligand excluded by PLIP UNX.4: 2 residues within 4Å: Chain A: R.8, E.21 Ligand excluded by PLIP UNX.5: 2 residues within 4Å: Chain A: R.8, K.19 Ligand excluded by PLIP UNX.6: 3 residues within 4Å: Chain A: F.39, S.40, G.43 Ligand excluded by PLIP UNX.7: 1 residues within 4Å: Chain A: A.2 Ligand excluded by PLIP UNX.8: 2 residues within 4Å: Chain A: K.25 Chain B: C.6 Ligand excluded by PLIP UNX.9: 3 residues within 4Å: Chain A: L.29, S.30, A.31 Ligand excluded by PLIP UNX.10: 2 residues within 4Å: Chain A: K.49, L.62 Ligand excluded by PLIP UNX.11: 4 residues within 4Å: Chain A: A.53, R.54, G.57 Ligands: UNX.12 Ligand excluded by PLIP UNX.12: 3 residues within 4Å: Chain A: A.53, G.57 Ligands: UNX.11 Ligand excluded by PLIP UNX.13: 1 residues within 4Å: Chain B: C.2 Ligand excluded by PLIP UNX.14: 1 residues within 4Å: Chain B: T.8 Ligand excluded by PLIP UNX.15: 3 residues within 4Å: Chain B: A.4, A.5 Chain C: G.10 Ligand excluded by PLIP UNX.16: 1 residues within 4Å: Chain C: A.4 Ligand excluded by PLIP UNX.17: 2 residues within 4Å: Chain C: A.4 Ligands: UNX.18 Ligand excluded by PLIP UNX.18: 4 residues within 4Å: Chain A: K.49 Chain C: A.4, A.5 Ligands: UNX.17 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, K. et al., Crystal structure of MBD2 with DNA. To Be Published

Release Date

2021-07-07

Peptides

Methyl-CpG-binding domain protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Methyl-CpG-binding domain protein 2

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