SMTL ID : 7n29.3 (2 other biounits)

Structure of NAD kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Covalent)

NAD.1: 17 residues within 4Å: Chain A: D.117, G.118, L.121, E.145, L.148, H.195, N.232, E.233, T.270, K.273, A.274, W.275, N.278, D.368, G.369 Chain B: K.260, I.337 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.117, A:E.145, A:N.232, A:E.233, A:W.275, A:N.278, A:D.368 Hydrophobic interactions: B:K.260 NAD.2: 17 residues within 4Å: Chain A: K.260, I.337 Chain B: D.117, G.118, L.121, E.145, L.148, H.195, N.232, E.233, T.270, K.273, A.274, W.275, N.278, D.368, G.369 6 PLIP interactions: 1 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:K.260 Hydrogen bonds: B:E.145, B:E.233, B:W.275, B:N.278, B:D.368

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Du, J. et al., Structure of human NADK2 reveals atypical assembly and regulation of NAD kinases from animal mitochondria. Proc.Natl.Acad.Sci.USA (2022)

Release Date

2022-05-04

Peptides

NAD kinase 2, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
D

NAD kinase 2, mitochondrial

Related Entries With Identical Sequence