- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- monomer
- Ligands
- 1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x SPM: SPERMINE(Non-covalent)
- 3 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)
Y01.4: 15 residues within 4Å:- Chain A: Y.478, L.956, L.959, A.960, L.963, V.964, T.967, T.968, V.971, L.972, R.975
- Ligands: Y01.5, LMT.7, LMT.8, LMT.9
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:L.959, A:L.963, A:V.964, A:V.964, A:T.967, A:T.968
- Salt bridges: A:R.975
Y01.5: 14 residues within 4Å:- Chain A: C.257, I.261, V.474, L.477, Y.478, S.481, R.482, R.485, L.963, T.967, V.971
- Ligands: Y01.4, PC1.6, LMT.8
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:L.477, A:Y.478, A:Y.478, A:Y.478, A:R.482, A:L.963, A:T.967
- Hydrogen bonds: A:S.481
- Salt bridges: A:R.485
Y01.11: 14 residues within 4Å:- Chain A: A.1058, G.1063, P.1069, L.1070, Y.1071, L.1077, L.1080, A.1081, S.1084, S.1085, V.1088, F.1123, F.1127
- Ligands: PC1.10
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:L.1070, A:L.1077, A:L.1077, A:L.1080, A:V.1088
- Hydrogen bonds: A:L.1070, A:Y.1071
- 2 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
PC1.6: 19 residues within 4Å:- Chain A: L.260, I.261, I.264, S.265, L.268, S.269, K.272, A.467, A.470, A.471, T.473, V.474, L.477, P.493, T.966, T.967, A.970, V.971
- Ligands: Y01.5
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:I.261, A:V.474, A:A.970
- Salt bridges: A:K.272
PC1.10: 14 residues within 4Å:- Chain A: F.1051, L.1054, I.1055, A.1058, L.1080, S.1084, V.1088, L.1092, L.1113, L.1116, V.1119, T.1120, F.1123
- Ligands: Y01.11
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:F.1051, A:L.1054, A:I.1055, A:V.1088, A:L.1092, A:L.1116, A:F.1123, A:F.1123
- 3 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.7: 12 residues within 4Å:- Chain A: L.956, A.960, V.964, I.965, L.1083, V.1086, L.1097, G.1099, P.1100, L.1101
- Ligands: Y01.4, LMT.8
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:L.956, A:A.960, A:V.964
- Hydrogen bonds: A:G.1099
LMT.8: 9 residues within 4Å:- Chain A: W.253, L.256, C.257, L.956, L.959, L.963
- Ligands: Y01.4, Y01.5, LMT.7
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:W.253, A:L.959, A:L.963
- Hydrogen bonds: A:W.253
LMT.9: 9 residues within 4Å:- Chain A: T.968, L.972, V.1074, P.1075, V.1078, A.1079, L.1082, L.1083
- Ligands: Y01.4
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:V.1074, A:P.1075, A:L.1082
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sim, S.I. et al., Structural basis of polyamine transport by human ATP13A2 (PARK9). Mol.Cell (2021)
- Release Date
- 2021-11-10
- Peptides
- Isoform 3 of Polyamine-transporting ATPase 13A2: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- monomer
- Ligands
- 1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x SPM: SPERMINE(Non-covalent)
- 3 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)
- 2 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
- 3 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sim, S.I. et al., Structural basis of polyamine transport by human ATP13A2 (PARK9). Mol.Cell (2021)
- Release Date
- 2021-11-10
- Peptides
- Isoform 3 of Polyamine-transporting ATPase 13A2: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.