SMTL ID : 7n7g.1

Crystal Structure of FosB from Enterococcus faecium with Fosfomycin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.66, Y.105, E.115 Chain B: H.7 Ligands: FCN.7 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 2 Ligand-Ligand interactions Metal complexes: A:H.66, A:E.115, B:H.7, FCN.7, FCN.7 MN.8: 4 residues within 4Å: Chain A: H.7 Chain B: H.66, E.115 Ligands: FCN.10 4 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B, 1 Ligand-Ligand interactions Metal complexes: A:H.7, B:H.66, B:E.115, FCN.10

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: D.24, I.25, G.27, W.79, W.82 Ligands: EDO.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.24 EDO.3: 5 residues within 4Å: Chain A: D.78, W.79, W.82 Chain B: M.1 Ligands: EDO.2 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:M.1 EDO.4: 4 residues within 4Å: Chain A: N.41, G.43, G.44 Ligands: EDO.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.41 EDO.5: 8 residues within 4Å: Chain A: G.27, D.29, N.41, L.42, G.43 Chain B: M.1, I.2 Ligands: EDO.4 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:D.29, A:G.43, B:I.2, B:I.2 EDO.6: 2 residues within 4Å: Chain A: R.99, E.130 No protein-ligand interaction detected (PLIP) EDO.9: 3 residues within 4Å: Chain A: M.1 Chain B: D.78, W.79 No protein-ligand interaction detected (PLIP)

2 x FCN: FOSFOMYCIN(Non-covalent)

FCN.7: 12 residues within 4Å: Chain A: Y.64, H.66, R.94, Y.105, E.115, R.124 Chain B: H.7, T.9, Y.39, W.46, A.48 Ligands: MN.1 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:Y.64, A:R.94, A:Y.105, A:R.124, A:R.124 Hydrophobic interactions: B:Y.39, B:W.46 FCN.10: 10 residues within 4Å: Chain A: H.7, T.9, Y.39, A.48 Chain B: Y.64, H.66, Y.105, E.115, R.124 Ligands: MN.8 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:Y.64, B:R.124, B:R.124 Hydrophobic interactions: A:Y.39 Water bridges: A:N.50, A:N.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wiltsie, V. et al., Structural and functional characterization of fosfomycin resistance conferred by FosB from Enterococcus faecium. Protein Sci. (2022)

Release Date

2022-07-27

Peptides

Metallothiol transferase FosB: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Metallothiol transferase FosB