SMTL ID : 7n9g.1 (2 other biounits)

Crystal structure of the Abl 1b Kinase domain in complex with Dasatinib and Imatinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x STI: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE(Non-covalent)

STI.1: 11 residues within 4Å: Chain A: A.109, L.112, L.113, A.205, E.234, G.235, P.237, V.240, M.268, F.269, Q.270 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.112, A:L.113, A:A.205, A:V.240, A:V.240 Hydrogen bonds: A:A.109, A:L.113, A:Q.270 Water bridges: A:A.205, A:G.235 Salt bridges: A:E.234

1 x 1N1: N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE(Non-covalent)

1N1.2: 22 residues within 4Å: Chain A: L.20, G.21, Y.25, V.28, A.41, V.42, K.43, M.62, V.71, I.85, T.87, E.88, F.89, M.90, T.91, Y.92, G.93, L.142, A.152, D.153, F.154 Ligands: PO4.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.85, A:T.87, A:F.89, A:F.154 Hydrogen bonds: A:T.87, A:M.90, A:M.90

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 1 residues within 4Å: Ligands: 1N1.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, T. et al., Imatinib can act as an Allosteric Activator of Abl Kinase. J.Mol.Biol. (2022)

Release Date

2022-04-27

Peptides

Tyrosine-protein kinase ABL1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase ABL1

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