SMTL ID : 7nfu.1 (1 other biounit)

Crystal structure of C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

14 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.40, C.73, G.74 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.74 Salt bridges: A:R.40 SO4.2: 5 residues within 4Å: Chain A: G.83, E.84, R.85, R.86, R.121 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.83, A:G.83, A:E.84, A:R.85, A:R.86 Salt bridges: A:R.85, A:R.86, A:R.121 SO4.3: 4 residues within 4Å: Chain A: P.168, Q.169, E.170, K.194 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.169, A:E.170 Salt bridges: A:K.194 SO4.4: 3 residues within 4Å: Chain A: T.143, Q.144, Q.155 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.144, A:Q.144, A:Q.155 SO4.5: 3 residues within 4Å: Chain A: Q.144, R.163, K.166 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.144 Salt bridges: A:R.163, A:K.166 SO4.6: 2 residues within 4Å: Chain A: Q.213, R.217 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.213 Salt bridges: A:R.217 SO4.7: 4 residues within 4Å: Chain A: R.7, F.11, K.103 Ligands: SO4.8 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.7, A:K.103 SO4.8: 4 residues within 4Å: Chain A: R.7, K.103, N.104 Ligands: SO4.7 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.104, A:N.104 Salt bridges: A:R.7, A:K.103 SO4.9: 3 residues within 4Å: Chain A: W.95, T.96, E.97 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.96, A:E.97 SO4.10: 5 residues within 4Å: Chain A: F.47, D.48, K.51, R.85, E.123 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.48 Salt bridges: A:K.51, A:R.85 SO4.11: 3 residues within 4Å: Chain A: V.28, R.29, H.30 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.28, A:H.30 Salt bridges: A:H.30 SO4.12: 3 residues within 4Å: Chain A: R.71, N.106, D.107 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.71, A:D.107 Water bridges: A:K.108 SO4.13: 3 residues within 4Å: Chain A: K.153, G.154, T.157 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.154, A:T.157 SO4.14: 3 residues within 4Å: Chain A: F.5, S.6, R.150 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.5, A:F.5, A:S.6 Salt bridges: A:R.150

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.15: 3 residues within 4Å: Chain A: G.74, N.75, R.77 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.75, A:R.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jalal, A.S.B. et al., CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc. Mol.Cell (2021)

Release Date

2021-02-17

Peptides

Nucleoid occlusion protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleoid occlusion protein

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