SMTL ID : 7ng7.1

Src kinase bound to eCF506 trapped in inactive conformation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 9 residues within 4Å: Chain A: I.180, K.181, T.183, A.184, P.185, A.188, V.225, L.226, V.229 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.181, A:A.184

1 x UCW: tert-butyl (4-(4-amino-1-(2-(4-(dimethylamino)piperidin-1-yl)ethyl)-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-2-methoxyphenyl)carbamate(Non-covalent)

UCW.2: 19 residues within 4Å: Chain A: L.27, G.28, V.35, A.47, I.48, K.49, M.68, I.90, T.92, E.93, Y.94, M.95, G.98, S.99, D.102, L.147, A.157, D.158, F.159 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.147, A:A.157, A:F.159, A:F.159 Hydrogen bonds: A:T.92, A:E.93, A:M.95, A:D.158 Water bridges: A:D.102 Salt bridges: A:D.102, A:D.102 pi-Cation interactions: A:K.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Temps, C. et al., A Conformation Selective Mode of Inhibiting SRC Improves Drug Efficacy and Tolerability. Cancer Res. (2021)

Release Date

2021-09-15

Peptides

Proto-oncogene tyrosine-protein kinase Src: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase Src