SMTL ID : 7nio.1

Crystal structure of the SARS-CoV-2 helicase APO form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.18, C.21, H.35, H.41 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.18, A:C.21, A:H.35, A:H.41 ZN.2: 4 residues within 4Å: Chain A: C.7, C.10, C.28, C.31 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.7, A:C.10, A:C.28, A:C.31 ZN.3: 4 residues within 4Å: Chain A: C.52, C.57, C.74, H.77 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.52, A:C.57, A:C.74, A:H.77 ZN.4: 4 residues within 4Å: Chain B: C.18, C.21, H.35, H.41 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.18, B:C.21, B:H.35, B:H.41 ZN.5: 4 residues within 4Å: Chain B: C.7, C.10, C.28, C.31 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.7, B:C.10, B:C.28, B:C.31 ZN.6: 4 residues within 4Å: Chain B: C.52, C.57, C.74, H.77 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.52, B:C.57, B:C.74, B:H.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newman, J.A. et al., Structure, mechanism and crystallographic fragment screening of the SARS-CoV-2 NSP13 helicase. Nat Commun (2021)

Release Date

2021-03-17

Peptides

SARS-CoV-2 helicase NSP13: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

SARS-CoV-2 helicase NSP13

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