- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.82 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ARG: ARGININE(Non-covalent)
- 6 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)
NHE.2: 8 residues within 4Å:- Chain A: D.102, R.105, D.188, G.189, V.190, V.191
- Chain F: N.118, A.122
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain F- Hydrogen bonds: A:V.191
- Water bridges: A:R.105
- Salt bridges: A:R.105
- Hydrophobic interactions: F:A.122
NHE.5: 8 residues within 4Å:- Chain B: D.102, R.105, D.188, G.189, V.190, V.191
- Chain E: N.118, A.122
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain E- Hydrogen bonds: B:V.191
- Water bridges: B:R.105
- Salt bridges: B:R.105
- Hydrophobic interactions: E:A.122
NHE.8: 8 residues within 4Å:- Chain C: D.102, R.105, D.188, G.189, V.190, V.191
- Chain D: N.118, A.122
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: C:V.191
- Water bridges: C:R.105
- Salt bridges: C:R.105
- Hydrophobic interactions: D:A.122
NHE.11: 8 residues within 4Å:- Chain C: N.118, A.122
- Chain D: D.102, R.105, D.188, G.189, V.190, V.191
4 PLIP interactions:1 interactions with chain C, 3 interactions with chain D- Hydrophobic interactions: C:A.122
- Hydrogen bonds: D:V.191
- Water bridges: D:R.105
- Salt bridges: D:R.105
NHE.14: 8 residues within 4Å:- Chain B: N.118, A.122
- Chain E: D.102, R.105, D.188, G.189, V.190, V.191
4 PLIP interactions:3 interactions with chain E, 1 interactions with chain B- Hydrogen bonds: E:V.191
- Water bridges: E:R.105
- Salt bridges: E:R.105
- Hydrophobic interactions: B:A.122
NHE.17: 8 residues within 4Å:- Chain A: N.118, A.122
- Chain F: D.102, R.105, D.188, G.189, V.190, V.191
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain A- Hydrogen bonds: F:V.191
- Water bridges: F:R.105
- Salt bridges: F:R.105
- Hydrophobic interactions: A:A.122
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 2 residues within 4Å:- Chain A: T.77, R.94
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.77, A:R.94, A:R.94
- Water bridges: A:R.94
EDO.6: 2 residues within 4Å:- Chain B: T.77, R.94
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:T.77, B:R.94, B:R.94
- Water bridges: B:R.94
EDO.9: 2 residues within 4Å:- Chain C: T.77, R.94
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:T.77, C:R.94, C:R.94
- Water bridges: C:R.94
EDO.12: 2 residues within 4Å:- Chain D: T.77, R.94
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:R.94, D:R.94
- Water bridges: D:T.77, D:R.94
EDO.15: 2 residues within 4Å:- Chain E: T.77, R.94
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:R.94, E:R.94
- Water bridges: E:T.77, E:R.94
EDO.18: 2 residues within 4Å:- Chain F: T.77, R.94
4 PLIP interactions:4 interactions with chain F- Hydrogen bonds: F:R.94, F:R.94
- Water bridges: F:T.77, F:R.94
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gupta, P. et al., A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis. Comput Struct Biotechnol J (2021)
- Release Date
- 2021-06-30
- Peptides
- Acetylglutamate kinase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.82 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ARG: ARGININE(Non-covalent)
- 6 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gupta, P. et al., A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis. Comput Struct Biotechnol J (2021)
- Release Date
- 2021-06-30
- Peptides
- Acetylglutamate kinase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A