SMTL ID : 7npl.1

ALPHA-1 ANTITRYPSIN (C232S) COMPLEXED WITH cmpd 11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

monomer

Ligands

1 x UKZ: N-((1S,2R)-1-(3-chloro-2-methylphenyl)-1-hydroxypentan-2-yl)-2-oxoindoline-4-carboxamide(Non-covalent)

UKZ.1: 17 residues within 4Å: Chain A: K.203, W.204, F.208, M.231, Y.254, F.262, L.298, P.299, K.300, L.301, L.348, I.350, E.352, F.376, F.380, F.382, M.384 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:W.204, A:M.231, A:Y.254, A:F.262, A:L.298, A:K.300, A:K.300, A:L.348, A:I.350, A:F.376, A:F.380 Hydrogen bonds: A:W.204, A:Y.254, A:P.299, A:L.301, A:L.301, A:E.352, A:E.352 pi-Stacking: A:W.204, A:W.204, A:F.262, A:F.382

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: R.206, F.237, M.252, K.253, R.291 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.206, A:K.253, A:K.253, A:K.253, A:K.253, A:R.291, A:R.291

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liddle, J. et al., The development of highly potent and selective small molecule correctors of Z alpha 1 -antitrypsin misfolding. Bioorg.Med.Chem.Lett. (2021)

Release Date

2021-04-07

Peptides

Alpha-1-antitrypsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-1-antitrypsin

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