SMTL ID : 7nsr.1

Myelin protein P2 I50del

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: S.15 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.15, H2O.5, H2O.5 MG.2: 4 residues within 4Å: Chain A: N.17, F.18, D.19, D.20 No protein-ligand interaction detected (PLIP)

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.3: 23 residues within 4Å: Chain A: F.18, Y.21, M.22, L.25, V.27, T.31, G.35, A.38, P.40, T.54, S.56, F.58, K.59, T.75, A.76, D.77, R.79, I.105, R.107, A.116, C.118, R.127, Y.129 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.25, A:A.38, A:T.54, A:F.58, A:I.105 Hydrogen bonds: A:Y.129 Water bridges: A:R.107, A:R.107, A:R.127, A:R.127 Salt bridges: A:R.107, A:R.127

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: A.38, K.39, S.56, T.57 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Uusitalo, M. et al., Human myelin protein P2: from crystallography to time-lapse membrane imaging and neuropathy-associated variants. Febs J. (2021)

Release Date

2021-09-01

Peptides

Myelin P2 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myelin P2 protein