- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.02 Å
- Oligo State
- homo-24-mer
- Ligands
- 96 x SO4: SULFATE ION(Non-functional Binders)
- 72 x CL: CHLORIDE ION(Non-functional Binders)
CL.5: 5 residues within 4Å:- Chain A: G.41
- Chain K: G.41
- Chain T: G.41
- Ligands: CL.85, CL.157
Ligand excluded by PLIPCL.6: 1 residues within 4Å:- Chain A: K.69
Ligand excluded by PLIPCL.7: 7 residues within 4Å:- Chain A: P.15, R.16, R.71
- Chain O: R.16, R.71
- Ligands: NA.8, CL.119
Ligand excluded by PLIPCL.13: 5 residues within 4Å:- Chain B: G.41
- Chain J: G.41
- Chain R: G.41
- Ligands: CL.77, CL.141
Ligand excluded by PLIPCL.14: 1 residues within 4Å:- Chain B: K.69
Ligand excluded by PLIPCL.15: 7 residues within 4Å:- Chain B: P.15, R.16, R.71
- Chain M: R.16, R.71
- Ligands: NA.16, CL.103
Ligand excluded by PLIPCL.21: 5 residues within 4Å:- Chain C: G.41
- Chain L: G.41
- Chain Q: G.41
- Ligands: CL.93, CL.133
Ligand excluded by PLIPCL.22: 1 residues within 4Å:- Chain C: K.69
Ligand excluded by PLIPCL.23: 7 residues within 4Å:- Chain C: P.15, R.16, R.71
- Chain P: R.16, R.71
- Ligands: NA.24, CL.127
Ligand excluded by PLIPCL.29: 5 residues within 4Å:- Chain D: G.41
- Chain I: G.41
- Chain S: G.41
- Ligands: CL.69, CL.149
Ligand excluded by PLIPCL.30: 1 residues within 4Å:- Chain D: K.69
Ligand excluded by PLIPCL.31: 7 residues within 4Å:- Chain D: P.15, R.16, R.71
- Chain N: R.16, R.71
- Ligands: NA.32, CL.111
Ligand excluded by PLIPCL.37: 5 residues within 4Å:- Chain E: G.41
- Chain P: G.41
- Chain W: G.41
- Ligands: CL.125, CL.181
Ligand excluded by PLIPCL.38: 1 residues within 4Å:- Chain E: K.69
Ligand excluded by PLIPCL.39: 7 residues within 4Å:- Chain E: P.15, R.16, R.71
- Chain S: R.16, R.71
- Ligands: NA.40, CL.151
Ligand excluded by PLIPCL.45: 5 residues within 4Å:- Chain F: G.41
- Chain N: G.41
- Chain V: G.41
- Ligands: CL.109, CL.173
Ligand excluded by PLIPCL.46: 1 residues within 4Å:- Chain F: K.69
Ligand excluded by PLIPCL.47: 7 residues within 4Å:- Chain F: P.15, R.16, R.71
- Chain Q: R.16, R.71
- Ligands: NA.48, CL.135
Ligand excluded by PLIPCL.53: 5 residues within 4Å:- Chain G: G.41
- Chain M: G.41
- Chain X: G.41
- Ligands: CL.101, CL.189
Ligand excluded by PLIPCL.54: 1 residues within 4Å:- Chain G: K.69
Ligand excluded by PLIPCL.55: 7 residues within 4Å:- Chain G: P.15, R.16, R.71
- Chain T: R.16, R.71
- Ligands: NA.56, CL.159
Ligand excluded by PLIPCL.61: 5 residues within 4Å:- Chain H: G.41
- Chain O: G.41
- Chain U: G.41
- Ligands: CL.117, CL.165
Ligand excluded by PLIPCL.62: 1 residues within 4Å:- Chain H: K.69
Ligand excluded by PLIPCL.63: 7 residues within 4Å:- Chain H: P.15, R.16, R.71
- Chain R: R.16, R.71
- Ligands: NA.64, CL.143
Ligand excluded by PLIPCL.69: 5 residues within 4Å:- Chain D: G.41
- Chain I: G.41
- Chain S: G.41
- Ligands: CL.29, CL.149
Ligand excluded by PLIPCL.70: 1 residues within 4Å:- Chain I: K.69
Ligand excluded by PLIPCL.71: 7 residues within 4Å:- Chain I: P.15, R.16, R.71
- Chain X: R.16, R.71
- Ligands: NA.72, CL.191
Ligand excluded by PLIPCL.77: 5 residues within 4Å:- Chain B: G.41
- Chain J: G.41
- Chain R: G.41
- Ligands: CL.13, CL.141
Ligand excluded by PLIPCL.78: 1 residues within 4Å:- Chain J: K.69
Ligand excluded by PLIPCL.79: 7 residues within 4Å:- Chain J: P.15, R.16, R.71
- Chain V: R.16, R.71
- Ligands: NA.80, CL.175
Ligand excluded by PLIPCL.85: 5 residues within 4Å:- Chain A: G.41
- Chain K: G.41
- Chain T: G.41
- Ligands: CL.5, CL.157
Ligand excluded by PLIPCL.86: 1 residues within 4Å:- Chain K: K.69
Ligand excluded by PLIPCL.87: 7 residues within 4Å:- Chain K: P.15, R.16, R.71
- Chain W: R.16, R.71
- Ligands: NA.88, CL.183
Ligand excluded by PLIPCL.93: 5 residues within 4Å:- Chain C: G.41
- Chain L: G.41
- Chain Q: G.41
- Ligands: CL.21, CL.133
Ligand excluded by PLIPCL.94: 1 residues within 4Å:- Chain L: K.69
Ligand excluded by PLIPCL.95: 7 residues within 4Å:- Chain L: P.15, R.16, R.71
- Chain U: R.16, R.71
- Ligands: NA.96, CL.167
Ligand excluded by PLIPCL.101: 5 residues within 4Å:- Chain G: G.41
- Chain M: G.41
- Chain X: G.41
- Ligands: CL.53, CL.189
Ligand excluded by PLIPCL.102: 1 residues within 4Å:- Chain M: K.69
Ligand excluded by PLIPCL.103: 7 residues within 4Å:- Chain B: R.16, R.71
- Chain M: P.15, R.16, R.71
- Ligands: CL.15, NA.104
Ligand excluded by PLIPCL.109: 5 residues within 4Å:- Chain F: G.41
- Chain N: G.41
- Chain V: G.41
- Ligands: CL.45, CL.173
Ligand excluded by PLIPCL.110: 1 residues within 4Å:- Chain N: K.69
Ligand excluded by PLIPCL.111: 7 residues within 4Å:- Chain D: R.16, R.71
- Chain N: P.15, R.16, R.71
- Ligands: CL.31, NA.112
Ligand excluded by PLIPCL.117: 5 residues within 4Å:- Chain H: G.41
- Chain O: G.41
- Chain U: G.41
- Ligands: CL.61, CL.165
Ligand excluded by PLIPCL.118: 1 residues within 4Å:- Chain O: K.69
Ligand excluded by PLIPCL.119: 7 residues within 4Å:- Chain A: R.16, R.71
- Chain O: P.15, R.16, R.71
- Ligands: CL.7, NA.120
Ligand excluded by PLIPCL.125: 5 residues within 4Å:- Chain E: G.41
- Chain P: G.41
- Chain W: G.41
- Ligands: CL.37, CL.181
Ligand excluded by PLIPCL.126: 1 residues within 4Å:- Chain P: K.69
Ligand excluded by PLIPCL.127: 7 residues within 4Å:- Chain C: R.16, R.71
- Chain P: P.15, R.16, R.71
- Ligands: CL.23, NA.128
Ligand excluded by PLIPCL.133: 5 residues within 4Å:- Chain C: G.41
- Chain L: G.41
- Chain Q: G.41
- Ligands: CL.21, CL.93
Ligand excluded by PLIPCL.134: 1 residues within 4Å:- Chain Q: K.69
Ligand excluded by PLIPCL.135: 7 residues within 4Å:- Chain F: R.16, R.71
- Chain Q: P.15, R.16, R.71
- Ligands: CL.47, NA.136
Ligand excluded by PLIPCL.141: 5 residues within 4Å:- Chain B: G.41
- Chain J: G.41
- Chain R: G.41
- Ligands: CL.13, CL.77
Ligand excluded by PLIPCL.142: 1 residues within 4Å:- Chain R: K.69
Ligand excluded by PLIPCL.143: 7 residues within 4Å:- Chain H: R.16, R.71
- Chain R: P.15, R.16, R.71
- Ligands: CL.63, NA.144
Ligand excluded by PLIPCL.149: 5 residues within 4Å:- Chain D: G.41
- Chain I: G.41
- Chain S: G.41
- Ligands: CL.29, CL.69
Ligand excluded by PLIPCL.150: 1 residues within 4Å:- Chain S: K.69
Ligand excluded by PLIPCL.151: 7 residues within 4Å:- Chain E: R.16, R.71
- Chain S: P.15, R.16, R.71
- Ligands: CL.39, NA.152
Ligand excluded by PLIPCL.157: 5 residues within 4Å:- Chain A: G.41
- Chain K: G.41
- Chain T: G.41
- Ligands: CL.5, CL.85
Ligand excluded by PLIPCL.158: 1 residues within 4Å:- Chain T: K.69
Ligand excluded by PLIPCL.159: 7 residues within 4Å:- Chain G: R.16, R.71
- Chain T: P.15, R.16, R.71
- Ligands: CL.55, NA.160
Ligand excluded by PLIPCL.165: 5 residues within 4Å:- Chain H: G.41
- Chain O: G.41
- Chain U: G.41
- Ligands: CL.61, CL.117
Ligand excluded by PLIPCL.166: 1 residues within 4Å:- Chain U: K.69
Ligand excluded by PLIPCL.167: 7 residues within 4Å:- Chain L: R.16, R.71
- Chain U: P.15, R.16, R.71
- Ligands: CL.95, NA.168
Ligand excluded by PLIPCL.173: 5 residues within 4Å:- Chain F: G.41
- Chain N: G.41
- Chain V: G.41
- Ligands: CL.45, CL.109
Ligand excluded by PLIPCL.174: 1 residues within 4Å:- Chain V: K.69
Ligand excluded by PLIPCL.175: 7 residues within 4Å:- Chain J: R.16, R.71
- Chain V: P.15, R.16, R.71
- Ligands: CL.79, NA.176
Ligand excluded by PLIPCL.181: 5 residues within 4Å:- Chain E: G.41
- Chain P: G.41
- Chain W: G.41
- Ligands: CL.37, CL.125
Ligand excluded by PLIPCL.182: 1 residues within 4Å:- Chain W: K.69
Ligand excluded by PLIPCL.183: 7 residues within 4Å:- Chain K: R.16, R.71
- Chain W: P.15, R.16, R.71
- Ligands: CL.87, NA.184
Ligand excluded by PLIPCL.189: 5 residues within 4Å:- Chain G: G.41
- Chain M: G.41
- Chain X: G.41
- Ligands: CL.53, CL.101
Ligand excluded by PLIPCL.190: 1 residues within 4Å:- Chain X: K.69
Ligand excluded by PLIPCL.191: 7 residues within 4Å:- Chain I: R.16, R.71
- Chain X: P.15, R.16, R.71
- Ligands: CL.71, NA.192
Ligand excluded by PLIP- 24 x NA: SODIUM ION(Non-functional Binders)
NA.8: 4 residues within 4Å:- Chain A: P.15, H.17
- Chain O: R.16
- Ligands: CL.7
Ligand excluded by PLIPNA.16: 4 residues within 4Å:- Chain B: P.15, H.17
- Chain M: R.16
- Ligands: CL.15
Ligand excluded by PLIPNA.24: 4 residues within 4Å:- Chain C: P.15, H.17
- Chain P: R.16
- Ligands: CL.23
Ligand excluded by PLIPNA.32: 4 residues within 4Å:- Chain D: P.15, H.17
- Chain N: R.16
- Ligands: CL.31
Ligand excluded by PLIPNA.40: 4 residues within 4Å:- Chain E: P.15, H.17
- Chain S: R.16
- Ligands: CL.39
Ligand excluded by PLIPNA.48: 4 residues within 4Å:- Chain F: P.15, H.17
- Chain Q: R.16
- Ligands: CL.47
Ligand excluded by PLIPNA.56: 4 residues within 4Å:- Chain G: P.15, H.17
- Chain T: R.16
- Ligands: CL.55
Ligand excluded by PLIPNA.64: 4 residues within 4Å:- Chain H: P.15, H.17
- Chain R: R.16
- Ligands: CL.63
Ligand excluded by PLIPNA.72: 4 residues within 4Å:- Chain I: P.15, H.17
- Chain X: R.16
- Ligands: CL.71
Ligand excluded by PLIPNA.80: 4 residues within 4Å:- Chain J: P.15, H.17
- Chain V: R.16
- Ligands: CL.79
Ligand excluded by PLIPNA.88: 4 residues within 4Å:- Chain K: P.15, H.17
- Chain W: R.16
- Ligands: CL.87
Ligand excluded by PLIPNA.96: 4 residues within 4Å:- Chain L: P.15, H.17
- Chain U: R.16
- Ligands: CL.95
Ligand excluded by PLIPNA.104: 4 residues within 4Å:- Chain B: R.16
- Chain M: P.15, H.17
- Ligands: CL.103
Ligand excluded by PLIPNA.112: 4 residues within 4Å:- Chain D: R.16
- Chain N: P.15, H.17
- Ligands: CL.111
Ligand excluded by PLIPNA.120: 4 residues within 4Å:- Chain A: R.16
- Chain O: P.15, H.17
- Ligands: CL.119
Ligand excluded by PLIPNA.128: 4 residues within 4Å:- Chain C: R.16
- Chain P: P.15, H.17
- Ligands: CL.127
Ligand excluded by PLIPNA.136: 4 residues within 4Å:- Chain F: R.16
- Chain Q: P.15, H.17
- Ligands: CL.135
Ligand excluded by PLIPNA.144: 4 residues within 4Å:- Chain H: R.16
- Chain R: P.15, H.17
- Ligands: CL.143
Ligand excluded by PLIPNA.152: 4 residues within 4Å:- Chain E: R.16
- Chain S: P.15, H.17
- Ligands: CL.151
Ligand excluded by PLIPNA.160: 4 residues within 4Å:- Chain G: R.16
- Chain T: P.15, H.17
- Ligands: CL.159
Ligand excluded by PLIPNA.168: 4 residues within 4Å:- Chain L: R.16
- Chain U: P.15, H.17
- Ligands: CL.167
Ligand excluded by PLIPNA.176: 4 residues within 4Å:- Chain J: R.16
- Chain V: P.15, H.17
- Ligands: CL.175
Ligand excluded by PLIPNA.184: 4 residues within 4Å:- Chain K: R.16
- Chain W: P.15, H.17
- Ligands: CL.183
Ligand excluded by PLIPNA.192: 4 residues within 4Å:- Chain I: R.16
- Chain X: P.15, H.17
- Ligands: CL.191
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Margreiter, M.A. et al., Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death. Comput Struct Biotechnol J (2022)
- Release Date
- 2022-01-19
- Peptides
- tRNA (uracil-5-)-methyltransferase homolog A: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.02 Å
- Oligo State
- homo-24-mer
- Ligands
- 96 x SO4: SULFATE ION(Non-functional Binders)
- 72 x CL: CHLORIDE ION(Non-functional Binders)
- 24 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Margreiter, M.A. et al., Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death. Comput Struct Biotechnol J (2022)
- Release Date
- 2022-01-19
- Peptides
- tRNA (uracil-5-)-methyltransferase homolog A: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A