SMTL ID : 7nwk.1

Crystal structure of CDK9-Cyclin T1 bound by compound 6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.81 Å

Oligo State

hetero-1-1-mer

Ligands

1 x UT5: N-((1R,3R)-3-(7-(4-fluoro-2-methoxyphenyl)-3H-imidazo[4,5-b]pyridin-2-yl)cyclopentyl)acetamide(Non-covalent)

UT5.1: 18 residues within 4Å: Chain A: I.25, Q.27, V.33, A.46, K.48, V.79, F.103, D.104, F.105, C.106, E.107, H.108, D.109, A.153, N.154, L.156, A.166, D.167 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.25, A:I.25, A:V.33, A:A.46, A:V.79, A:F.103, A:F.105, A:D.109, A:L.156, A:L.156 Hydrogen bonds: A:C.106, A:C.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barlaam, B. et al., Discovery of a Series of 7-Azaindoles as Potent and Highly Selective CDK9 Inhibitors for Transient Target Engagement. J.Med.Chem. (2021)

Release Date

2021-10-27

Peptides

Cyclin-dependent kinase 9: A
Cyclin-T1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 9

Cyclin-T1

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