SMTL ID : 7nx0.1

LTK:ALKAL1 complex stabilized by a Nanobody

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-2-2-1-mer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: K.68, H.73, L.74 Chain C: S.9 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain A Water bridges: C:S.9, C:T.10, C:T.10 Hydrogen bonds: A:K.68, A:H.73 NA.2: 2 residues within 4Å: Chain A: P.107 Ligands: NA.3 No protein-ligand interaction detected (PLIP) NA.3: 4 residues within 4Å: Chain A: P.107 Chain C: S.14, G.15 Ligands: NA.2 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.14 NA.4: 3 residues within 4Å: Chain C: R.16, Q.236, W.242 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Q.236 Water bridges: C:W.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Munck, S. et al., Structural basis of cytokine-mediated activation of ALK family receptors. Nature (2021)

Release Date

2021-10-27

Peptides

Leukocyte tyrosine kinase receptor: AC
Nb3.16: BD
ALK and LTK ligand 1: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

C
B

B
D

D
E

E
A

Leukocyte tyrosine kinase receptor

Nb3.16

ALK and LTK ligand 1

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