SMTL ID : 7nx4.1

Crystal structure of the TG and EGF-like domains of ALK

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: E.156, E.157, V.160, N.161 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.160 Hydrogen bonds: A:N.161 NAG.2: 3 residues within 4Å: Chain A: Y.337, N.339, S.341 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.337, A:N.339, A:S.341 NAG.3: 2 residues within 4Å: Chain A: N.217, S.219 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.219 NAG.4: 2 residues within 4Å: Chain A: L.214, N.216 No protein-ligand interaction detected (PLIP)

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 2 residues within 4Å: Chain A: D.85, H.336 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.85, A:D.85, A:H.336

2 x NI: NICKEL (II) ION(Non-covalent)

NI.6: 2 residues within 4Å: Chain A: E.133, E.269 No protein-ligand interaction detected (PLIP) NI.7: 4 residues within 4Å: Chain A: H.210, E.212, D.307, K.324 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.212, A:D.307

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Munck, S. et al., Structural basis of cytokine-mediated activation of ALK family receptors. Nature (2021)

Release Date

2021-10-27

Peptides

ALK tyrosine kinase receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ALK tyrosine kinase receptor

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