SMTL ID : 7nyb.1

TrmB complex with SAM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 16 residues within 4Å: Chain A: V.45, G.46, T.47, I.68, E.69, L.70, I.95, D.96, A.97, N.115, F.116, D.118, L.130, T.191, E.192, Y.193 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.46, A:L.70, A:A.97, A:N.115, A:T.191, A:E.192, A:Y.193 Salt bridges: A:D.118 SAM.2: 17 residues within 4Å: Chain B: E.44, G.46, T.47, G.48, E.69, L.70, F.71, I.95, D.96, A.97, N.115, F.116, D.118, L.130, T.191, E.192, Y.193 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.46, B:L.70, B:D.96, B:D.96, B:A.97, B:T.191, B:E.192, B:Y.193 Water bridges: B:G.50 Salt bridges: B:D.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Blersch, K.F. et al., Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA. Rna Biol. (2021)

Release Date

2021-09-15

Peptides

tRNA (guanine-N(7)-)-methyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

tRNA (guanine-N(7)-)-methyltransferase

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