SMTL ID : 7o09.1

Crystal structure of the human METTL3-METTL14 complex bound to Compound 7 (ADO_AC_074)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x UXK: 6-[4-[6-[(4,4-dimethylpiperidin-1-yl)methyl]pyridin-3-yl]-1-oxa-4,9-diazaspiro[5.5]undecan-9-yl]-N-(phenylmethyl)pyrimidin-4-amine(Non-covalent)

UXK.1: 20 residues within 4Å: Chain A: C.42, D.43, I.44, R.45, D.61, P.62, P.63, G.73, T.74, L.75, W.97, T.99, W.123, E.147, S.177, K.179, F.200, G.201, G.214, N.215 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:P.63, A:W.97, A:W.123, A:K.179, A:F.200 Hydrogen bonds: A:D.43, A:I.44, A:S.177, A:N.215 Salt bridges: A:D.61, A:E.147 pi-Stacking: A:F.200

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: E.104 Chain B: R.140, R.144, R.149, R.150 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:R.144, B:R.150 Hydrogen bonds: B:R.150 Salt bridges: B:R.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolbois, A. et al., 1,4,9-Triazaspiro[5.5]undecan-2-one Derivatives as Potent and Selective METTL3 Inhibitors. J.Med.Chem. (2021)

Release Date

2021-09-01

Peptides

N6-adenosine-methyltransferase catalytic subunit: A
N6-adenosine-methyltransferase non-catalytic subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

N6-adenosine-methyltransferase catalytic subunit

N6-adenosine-methyltransferase non-catalytic subunit

Related Entries With Identical Sequence