SMTL ID : 7o0l.1

Crystal structure of the human METTL3-METTL14 complex bound to Compound 8 (ADO_AC_093)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: R.140, R.144, R.149, R.150 Chain B: E.104 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.144, A:R.150 Hydrogen bonds: A:R.150 Salt bridges: A:R.144

1 x UXW: 4-[6-[(4,4-dimethylpiperidin-1-yl)methyl]pyridin-3-yl]-9-[6-[(phenylmethyl)amino]pyrimidin-4-yl]-1,4,9-triazaspiro[5.5]undecan-2-one(Non-covalent)

UXW.2: 20 residues within 4Å: Chain B: C.42, D.43, I.44, R.45, D.61, P.62, P.63, Y.72, G.73, T.74, L.75, W.97, E.147, S.177, K.179, F.200, R.202, G.214, N.215, Q.216 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:P.63, B:Y.72, B:Y.72, B:W.97, B:S.177, B:K.179 Hydrogen bonds: B:D.43, B:I.44, B:N.215, B:Q.216, B:Q.216 Salt bridges: B:D.61 pi-Stacking: B:F.200

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolbois, A. et al., 1,4,9-Triazaspiro[5.5]undecan-2-one Derivatives as Potent and Selective METTL3 Inhibitors. J.Med.Chem. (2021)

Release Date

2021-09-01

Peptides

N6-adenosine-methyltransferase non-catalytic subunit: A
N6-adenosine-methyltransferase catalytic subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

N6-adenosine-methyltransferase non-catalytic subunit

N6-adenosine-methyltransferase catalytic subunit

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