SMTL ID : 7o0q.1

Crystal structure of the human METTL3-METTL14 complex bound to Compound 12 (ADO_AD_066)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

hetero-1-1-mer

Ligands

1 x UY2: 3-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-8-[6-(methylamino)pyrimidin-4-yl]-1,3,8-triazaspiro[4.5]decan-2-one(Non-covalent)

UY2.1: 18 residues within 4Å: Chain A: C.42, D.43, I.44, R.45, D.61, P.62, Y.72, L.75, W.97, W.123, E.147, S.177, K.179, F.200, G.201, R.202, G.214, N.215 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.72, A:W.97, A:W.123, A:E.147, A:S.177, A:K.179 Hydrogen bonds: A:I.44, A:R.45, A:N.215 Salt bridges: A:D.61, A:E.147 pi-Stacking: A:Y.72, A:F.200

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain B: D.52, H.227, H.231 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.231

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 5 residues within 4Å: Chain A: E.104 Chain B: R.140, R.144, R.149, R.150 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:R.140, B:R.144, B:R.150 Hydrogen bonds: B:R.150 Salt bridges: B:R.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bedi, R.K. et al., Crystal structure of the human METTL3-METTL14 complex bound to Compound 12 (ADO_AD_066). To Be Published

Release Date

2021-09-15

Peptides

N6-adenosine-methyltransferase catalytic subunit: A
N6-adenosine-methyltransferase non-catalytic subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

N6-adenosine-methyltransferase catalytic subunit

N6-adenosine-methyltransferase non-catalytic subunit

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