SMTL ID : 7o1m.1

Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme alpha-H462A, beta-C92A mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

hetero-2-2-mer

Ligands

14 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.195, L.201 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.195 SO4.2: 2 residues within 4Å: Chain A: P.193, R.195 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.195 SO4.3: 2 residues within 4Å: Chain A: N.380, R.402 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.380 Salt bridges: A:R.402 SO4.4: 3 residues within 4Å: Chain A: S.163, R.164, N.249 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.164, A:N.249 SO4.6: 4 residues within 4Å: Chain B: P.275, G.309, Q.310, V.311 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.310, B:V.311 SO4.7: 4 residues within 4Å: Chain B: Q.289, V.290, D.291 Chain C: H.24 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:D.291 Salt bridges: C:H.24 SO4.8: 4 residues within 4Å: Chain A: H.243 Chain B: P.646, P.647, L.648 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:L.648 Salt bridges: A:H.243 SO4.9: 2 residues within 4Å: Chain C: R.195, L.201 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.195 SO4.10: 2 residues within 4Å: Chain C: P.193, R.195 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.195 SO4.11: 2 residues within 4Å: Chain C: N.380, R.402 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.380 Salt bridges: C:R.402 SO4.12: 3 residues within 4Å: Chain C: S.163, R.164, N.249 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:R.164, C:N.249 SO4.14: 4 residues within 4Å: Chain D: P.275, G.309, Q.310, V.311 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:Q.310, D:V.311 SO4.15: 4 residues within 4Å: Chain A: H.24 Chain D: Q.289, V.290, D.291 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain D Salt bridges: A:H.24 Hydrogen bonds: D:D.291, D:D.291 SO4.16: 4 residues within 4Å: Chain C: H.243 Chain D: P.646, P.647, L.648 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain D Salt bridges: C:H.243 Hydrogen bonds: D:L.648

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 3 residues within 4Å: Chain B: G.725, D.726, R.727 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.726, B:R.727, B:R.727 GOL.13: 3 residues within 4Å: Chain D: G.725, D.726, R.727 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:D.726, D:R.727, D:R.727

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalwani, S. et al., Substrate specificity and conformational flexibility properties of the Mycobacterium tuberculosis beta-oxidation trifunctional enzyme. J.Struct.Biol. (2021)

Release Date

2021-08-25

Peptides

Putative acyltransferase Rv0859: AC
3-hydroxyacyl-CoA dehydrogenase: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

C
D

B
A

D
A

Putative acyltransferase Rv0859

3-hydroxyacyl-CoA dehydrogenase

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