SMTL ID : 7o2e.1

Crystal structure of the human METTL3-METTL14 complex bound to Compound 21 (ADO_AD_089)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x UZH: 4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]-3-fluoranyl-phenyl]-9-[6-(methylamino)pyrimidin-4-yl]-1,4,9-triazaspiro[5.5]undecan-2-one(Non-covalent)

UZH.1: 19 residues within 4Å: Chain A: C.42, D.43, I.44, R.45, D.61, P.62, P.63, Y.72, G.73, L.75, W.97, E.147, S.177, F.200, G.201, R.202, G.214, N.215, Q.216 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:P.63, A:Y.72, A:W.97, A:W.97, A:E.147, A:S.177 Hydrogen bonds: A:D.43, A:I.44, A:N.215, A:N.215, A:Q.216, A:Q.216 Salt bridges: A:D.61 pi-Stacking: A:F.200

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 4 residues within 4Å: Chain A: E.104 Chain B: R.144, R.149, R.150 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:R.150 Hydrogen bonds: B:R.150 Salt bridges: B:R.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolbois, A. et al., 1,4,9-Triazaspiro[5.5]undecan-2-one Derivatives as Potent and Selective METTL3 Inhibitors. J.Med.Chem. (2021)

Release Date

2021-09-01

Peptides

N6-adenosine-methyltransferase catalytic subunit: A
N6-adenosine-methyltransferase non-catalytic subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

N6-adenosine-methyltransferase catalytic subunit

N6-adenosine-methyltransferase non-catalytic subunit

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