SMTL ID : 7o4e.1 (1 other biounit)

The DYW domain of A. thaliana OTP86 in its inactive state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.102, H.125, C.132, C.134 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.102, A:H.125, A:C.132, A:C.134 ZN.2: 5 residues within 4Å: Chain A: H.68, H.70, E.72, C.98, C.101 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.70, A:C.98, A:C.101 ZN.3: 4 residues within 4Å: Chain B: H.102, H.125, C.132, C.134 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.102, B:H.125, B:C.132, B:C.134 ZN.4: 5 residues within 4Å: Chain B: H.68, H.70, E.72, C.98, C.101 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.70, B:C.98, B:C.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Takenaka, M. et al., DYW domain structures imply an unusual regulation principle in plant organellar RNA editing catalysis. Nat Catal (2021)

Release Date

2021-06-30

Peptides

Pentatricopeptide repeat-containing protein At3g63370, chloroplastic: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Pentatricopeptide repeat-containing protein At3g63370, chloroplastic

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