SMTL ID : 7o9g.1

Escherichia coli Ffh in complex with ppGpp

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x G4P: GUANOSINE-5',3'-TETRAPHOSPHATE(Non-covalent)

G4P.1: 17 residues within 4Å: Chain A: L.109, Q.110, G.111, A.112, G.113, K.114, T.115, T.116, K.120, Q.148, K.250, D.252, G.275, V.276, G.277, E.278 Ligands: MG.2 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:L.109, A:G.111, A:A.112, A:G.113, A:K.114, A:T.115, A:T.115, A:T.116, A:T.116, A:K.120, A:Q.148, A:K.250, A:K.250, A:G.277, A:E.278 Salt bridges: A:K.114, A:D.252, A:E.278

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: T.115, D.139 Ligands: G4P.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czech, L. et al., Inhibition of SRP-dependent protein secretion by the bacterial alarmone (p)ppGpp. Nat Commun (2022)

Release Date

2022-02-02

Peptides

Signal recognition particle protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Signal recognition particle protein

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