SMTL ID : 7oas.1

Structural basis for targeted p97 remodeling by ASPL as prerequisite for p97 trimethylation by METTL21D

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 18 residues within 4Å: Chain A: G.29, T.31, V.32, W.33, S.36, G.66, A.67, G.68, D.87, Q.88, V.91, L.123, D.124, W.125, T.144, D.145, Y.148, L.152 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:T.31, A:W.33, A:S.36, A:S.36, A:E.64, A:G.66, A:G.68, A:Q.88, A:W.125, A:Y.148 Water bridges: A:G.29, A:G.66, A:C.69, A:T.144, A:T.144, A:T.144 pi-Stacking: A:W.125, A:W.125, A:W.125

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: K.89, E.122, D.124 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.89, A:E.122 Water bridges: A:E.122, A:E.122, A:D.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petrovic, S. et al., Structural remodeling of AAA+ ATPase p97 by adaptor protein ASPL facilitates posttranslational methylation by METTL21D. Proc.Natl.Acad.Sci.USA (2023)

Release Date

2022-08-03

Peptides

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein