SMTL ID : 7oc7.1

LasB, alpha-alkyl-N-aryl mercaptoacetamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.140, H.144, Y.155, E.164 Ligands: V85.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.140, A:H.144, A:E.164

1 x V85: (2R)-N,3-diphenyl-2-sulfanyl-propanamide(Non-covalent)

V85.2: 10 residues within 4Å: Chain A: V.137, H.140, E.141, Y.155, E.164, I.186, L.197, R.198, H.223 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.137, A:I.186, A:L.197, A:L.197 Hydrogen bonds: A:N.112, A:R.198, A:R.198 pi-Stacking: A:H.140

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 5 residues within 4Å: Chain A: D.136, E.172, E.175, D.183, L.185 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.136, A:E.172, A:E.175, A:L.185, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kaya, C. et al., Substrate-Inspired Fragment Merging and Growing Affords Efficacious LasB Inhibitors. Angew.Chem.Int.Ed.Engl. (2022)

Release Date

2022-01-19

Peptides

Neutral metalloproteinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Neutral metalloproteinase

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