SMTL ID : 7odc.1

CRYSTAL STRUCTURE ORNITHINE DECARBOXYLASE FROM MOUSE, TRUNCATED 37 RESIDUES FROM THE C-TERMINUS, TO 1.6 ANGSTROM RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 13 residues within 4Å: Chain A: A.67, K.69, D.88, R.154, H.197, G.236, G.237, E.274, P.275, G.276, R.277, Y.389 Chain B: C.360 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:K.69 Hydrogen bonds: A:D.88, A:G.237, A:E.274, A:E.274, A:G.276, A:R.277 Water bridges: A:R.154, A:F.238, A:R.277, A:R.277, A:D.332 Salt bridges: A:H.197, A:R.277 pi-Stacking: A:H.197 PLP.2: 13 residues within 4Å: Chain A: C.360 Chain B: A.67, K.69, D.88, R.154, H.197, G.236, G.237, E.274, P.275, G.276, R.277, Y.389 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:K.69 Hydrogen bonds: B:D.88, B:G.237, B:E.274, B:E.274, B:G.276, B:R.277 Water bridges: B:R.154, B:F.238, B:R.277, B:R.277, B:D.332 Salt bridges: B:H.197, B:R.277 pi-Stacking: B:H.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kern, A.D. et al., Structure of mammalian ornithine decarboxylase at 1.6 A resolution: stereochemical implications of PLP-dependent amino acid decarboxylases. Structure Fold.Des. (1999)

Release Date

1999-10-22

Peptides

PROTEIN (ORNITHINE DECARBOXYLASE): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROTEIN (ORNITHINE DECARBOXYLASE)