SMTL ID : 7odm.1

AmGSTF1 Y118S variant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x VDW: [(2~{S})-5-[[(2~{R})-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-3-sulfanyl-propan-2-yl]amino]-1-oxidanyl-1,5-bis(oxidanylidene)pentan-2-yl]azanium(Non-covalent)

VDW.1: 14 residues within 4Å: Chain A: S.12, N.14, F.36, H.41, K.42, G.53, Q.54, I.55, P.56, E.67, S.68, R.69 Chain B: E.103, H.107 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.14, A:Q.54, A:Q.54, A:I.55, A:E.67, A:S.68, A:R.69 Water bridges: A:R.69 Salt bridges: A:K.42 VDW.2: 14 residues within 4Å: Chain A: E.103, H.107 Chain B: S.12, N.14, F.36, H.41, K.42, G.53, Q.54, I.55, P.56, E.67, S.68, R.69 9 PLIP interactions: 8 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.14, B:Q.54, B:Q.54, B:I.55, B:E.67, B:S.68, B:R.69 Salt bridges: B:K.42 Water bridges: A:E.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schwarz, M. et al., Flavonoid-based inhibitors of the Phi-class glutathione transferase from black-grass to combat multiple herbicide resistance. Org.Biomol.Chem. (2021)

Release Date

2022-04-20

Peptides

Glutathione transferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
AAA

Glutathione transferase