SMTL ID : 7ohn.1

SaFtsZ complexed with GDP, AlF4- and Mg2+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 23 residues within 4Å: Chain A: G.30, G.31, G.32, N.35, R.39, G.114, M.115, G.116, G.117, G.118, T.119, G.120, T.143, P.145, F.146, E.149, R.153, N.176, L.179, F.193, A.196 Ligands: ALF.3, MG.4 27 PLIP interactions: 27 interactions with chain A Hydrogen bonds: A:G.31, A:G.32, A:N.35, A:R.39, A:R.39, A:G.118, A:T.119, A:T.119, A:G.120, A:T.143, A:E.149, A:R.153, A:R.153, A:N.176, A:N.176 Water bridges: A:N.54, A:N.54, A:T.55, A:S.113, A:G.114, A:M.115, A:G.117, A:T.121, A:E.149, A:E.149 pi-Stacking: A:F.193 pi-Cation interactions: A:F.193

1 x K: POTASSIUM ION(Non-covalent)

K.2: 8 residues within 4Å: Chain A: L.210, I.211, V.213, S.214, G.215, N.218, L.219, D.220 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:L.210, A:V.213, A:L.219, H2O.7, H2O.7

1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)

ALF.3: 12 residues within 4Å: Chain A: T.55, G.80, A.81, G.82, A.83, N.84, G.117, G.118, T.119, R.153 Ligands: GDP.1, MG.4 No protein-ligand interaction detected (PLIP)

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 4 residues within 4Å: Chain A: G.31, N.54 Ligands: GDP.1, ALF.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruiz, F.M. et al., FtsZ filament structures in different nucleotide states reveal the mechanism of assembly dynamics. Plos Biol. (2022)

Release Date

2022-03-02

Peptides

Cell division protein FtsZ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division protein FtsZ

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