SMTL ID : 7oih.3 (3 other biounits)

Glycosylation in the crystal structure of neutrophil myeloperoxidase

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.60 Å
Oligo State
homo-dimer
Ligands
2 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG- BMA- MAN- MAN- FUC: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
9 x CL: CHLORIDE ION(Non-functional Binders)
2 x CA: CALCIUM ION(Non-covalent)
2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)
2 x SCN: THIOCYANATE ION(Non-functional Binders)
2 x PO4: PHOSPHATE ION(Non-functional Binders)
1 x 8PR: Paroxetine(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Krawczyk, L. et al., Native glycosylation and binding of the antidepressant paroxetine in a low-resolution crystal structure of human myeloperoxidase. Acta Crystallogr D Struct Biol (2022)
Release Date
2022-08-24
Peptides
Myeloperoxidase: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
E
B
F

Myeloperoxidase

Related Entries With Identical Sequence

7oih.1 | 7oih.2 | 7oih.4