SMTL ID : 7ojc.1

SaFtsZ(Q48A) complexed with GDP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 23 residues within 4Å: Chain A: G.13, G.14, G.15, N.18, R.22, G.97, M.98, G.99, G.100, G.101, T.102, G.103, T.104, T.126, P.128, F.129, E.132, R.136, N.159, L.162, F.176, A.179 Ligands: EDO.3 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:G.14, A:G.15, A:R.22, A:R.22, A:G.101, A:T.102, A:T.102, A:T.102, A:G.103, A:T.126, A:E.132, A:E.132, A:R.136, A:R.136, A:N.159, A:N.159 Water bridges: A:N.37, A:T.38, A:G.97, A:M.98, A:G.100, A:T.104, A:E.132 pi-Stacking: A:F.176 pi-Cation interactions: A:F.176

1 x K: POTASSIUM ION(Non-covalent)

K.2: 7 residues within 4Å: Chain A: L.193, V.196, S.197, G.198, N.201, L.202, D.203 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:L.193, A:V.196, A:L.202, H2O.6

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 12 residues within 4Å: Chain A: G.15, G.16, N.18, A.19, R.22, T.95, S.96, G.97, V.124, V.125, T.126 Ligands: GDP.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.22, A:T.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruiz, F.M. et al., FtsZ filament structures in different nucleotide states reveal the mechanism of assembly dynamics. Plos Biol. (2022)

Release Date

2022-03-02

Peptides

Cell division protein FtsZ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division protein FtsZ